Structure Determination


NMRFAM provides cutting-edge technology solutions to get your biomolecular structure determined. We have sufficient computing servers to run structure calculations, and also have many automation software packages installed on-site to reduce your manual intervention.

Determination of structures consists of 1) restraint collection, 2) structure calculation, 3) structure validation and refinement. These procedures can be conducted either by pre-installed software packages at NMRFAM or installation of the packages on your site. Especially, we present PONDEROSA-C/S software package for a convenient, robust and reliable automated structure determination platform to provide high-quality biomolecular structures in a couple of days. Please regard our software page for available software packages.

We are happy to assist with your project to get through these steps by offering NMRFAM powered high-throughput NMR solutions. Please contact Dr. Milo Westler for details.

[Schematic diagram of PONDEROSA-C/S package]

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Biochem 800 – Practical Nuclear Magnetic Resonance Theory

Biochem 801 – Biochemical Applications of Nuclear Magnetic Resonance

"The Future of NMR-Based Metabolomics, Current Opinion in Biotechnology (2017), pp. 34-40

Workshop "Ultrahigh Field NMR and MRI: Science at a Crossroads" November 12-13, NIH

Documents on the use of the Bruker-Axs Nanostar,SAXS instrument and analysis of SAXS data are now available.

NMRFAM-SPARKY Distribution - the popular NMR analysis program SPARKY recompiled (including updated python and Tcl/Tk) with incorporation of PINE-Sparky, enhancements to import/export to the structural analysis program CYANA, and other useful python extensions.

ADAPT-NMR Enhancer: Complete Package for Reduced Dimensionality in Protein NMR Spectroscopy

RNA-PAIRS: RNA Probabilistic Assignment of Imino Resonance Shifts

PACSY, a Relational Database Management System for Protein Structure and Chemical Shift Analysis 

 

Donate to NMRFAM. US tax-deductible donation can be made to NMRFAM
Please write check payable to "UW Foundation, Account 112152802"  
And mail to: 
Attn: Sarah Lynn Traver Saunders
Associate Administrative Program Specialist 
University of Wisconsin-Madison 
433 Babcock Drive 
Madison, WI 53706 
Tel: 608-265-2507 or email 

 

1st: Lai Bergeman 
Rm 171; Phone 262-3173

2nd: Milo Westler
Rm B160; Phone 263-9599

3rd: Mark Anderson
Rm B224; Phone 265-3303

4th: Marco Tonelli
Rm B160; Phone 263-9493

5th: John Markley
Rm 171A; Phone 263-9349

We welcome your questions and feedback!

NMRFAM Established 1987